So there is a bug in AGS where Game.agf changes the hours of the last modified tag of every audio file in the project on save.
Growing increasingly frustrated with faulty git merges because of conflicting timestamps I decided to go into the source code of AGS and fix this myself. I've requested a merge, but it hasn't been approved yet, as they are very busy developing AGS v3.4. However anyone developing with us on git should use this so I decided to post the binary here so that we avoid as much havoc as possible.
Simply download the file and replace it with the already existing one wherever you have AGS v3.3.3 on your computer.
https://drive.google.com/open?id=0B2Y5H ... authuser=0